Accelerated Dereplication of Natural Products, Supported by Reference Libraries

Authors

  • Jens Bitzer InterMed Discovery GmbH, Otto-Hahn-Straße 15, D-44227 Dortmund, Germany
  • Bärbel Köpcke InterMed Discovery GmbH, Otto-Hahn-Straße 15, D-44227 Dortmund, Germany
  • Marc Stadler InterMed Discovery GmbH, Otto-Hahn-Straße 15, D-44227 Dortmund, Germany
  • Veronika Hellwig University of Lüneburg, Institute for Ecology and Environmental Chemistry and GKSS-Research Centre, Institute for Coastal Research, D-21502 Geesthacht, Germany
  • Yu-Ming Ju Academia Sinica, Institute of Plant and Microbial Biology, Nankang, Taipei 11529, Taiwan
  • Stephan Seip Bayer HealthCare AG, D-54368 Leverkusen, Germany
  • Thomas Henkel Tel.: +49 231 9742 6060, thomas. , InterMed Discovery GmbH, Otto-Hahn-Straße 15, D-44227 Dortmund, Germany, Fax: +49 231 9742 6061, Email: henkel@intermed-discovery.com

DOI:

https://doi.org/10.2533/chimia.2007.332

Keywords:

Dereplication, Multidetector hplc, Natural products, Nmr, Secondary metabolites, Tandem mass spectrometry

Abstract

Natural products are an indispensable source for drug discovery. The major challenge for exploiting this evolutionary optimized pool of potential lead structures is the fast and reliable recognition of known compounds, i. e. dereplication. This task is essential for the discovery process in high-throughput screening scenarios, since it allows the focus to be placed on novel chemical structures at an early stage. Furthermore, information on identified compounds will help to rationalize observed bioactivities. This article describes an effective, library-supported strategy for the dereplication of crude extracts and pre-fractionated samples, using an HPLC-based multidetector platform and NMR techniques, respectively.

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Published

2007-06-27

How to Cite

[1]
J. Bitzer, B. Köpcke, M. Stadler, V. Hellwig, Y.-M. Ju, S. Seip, T. Henkel, Chimia 2007, 61, 332, DOI: 10.2533/chimia.2007.332.